FastQCFastQC Report
Fri 23 Dec 2022
EGAF00003946928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences330664394
Sequences flagged as poor quality0
Sequence length98
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCT5294780.1601254957012396No Hit
GTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGA4593170.13890730551412198No Hit
GCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAAG4562030.13796556517058806No Hit
ATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTG3649180.11035902462482852No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)