FastQCFastQC Report
Fri 20 Jan 2023
EGAF00003946940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences379700961
Sequences flagged as poor quality0
Sequence length98
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAG4498990.11848771696946007No Hit
GTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGT4044100.10650749972687058No Hit
GTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGA3875040.1020550485254105No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)