FastQCFastQC Report
Tue 7 Feb 2023
EGAF00003946951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152829461
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTACGTTCAACTCACAGAGTTGAACGTTCCCTTAGACAGAGCAGATT53404633.494393662750665No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC5308960.34737804905298986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)