FastQCFastQC Report
Wed 8 May 2024
EGAF00003948245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003948245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences615354
Total Bases38.7 Mbp
Sequences flagged as poor quality0
Sequence length63
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGA10940.17778384474627612No Hit
GTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAG7170.11651829678526507No Hit

[OK]Adapter Content

Adapter graph