FastQCFastQC Report
Tue 7 May 2024
EGAF00003948376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003948376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445323699
Total Bases67.2 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTATGCTTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT37611520.844588331689035No Hit
TATTATGCTTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA25051720.5625507929682404No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG19174820.4305816205842663TruSeq Adapter, Index 7 (97% over 34bp)
TATTATGCTTCGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC11437470.25683497253084664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)