FastQCFastQC Report
Mon 6 May 2024
EGAF00003948384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003948384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428758623
Total Bases64.7 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCATCAGCGCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT17817240.4155540913750906No Hit
TGCATCAGCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA11787210.2749148207801759No Hit
TGCATCAGCGCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5435530.1267736602465952No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)