FastQCFastQC Report
Sun 5 May 2024
EGAF00003948444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003948444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486799891
Total Bases73.5 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTAATTGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT49860781.0242561866144706No Hit
TCTTAATTGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA34172980.701992351103464No Hit
TCTTAATTGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC10329340.21218862598307361No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)