FastQCFastQC Report
Wed 10 Aug 2022
EGAF00003949661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003949661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495477058
Sequences flagged as poor quality0
Sequence length35-151
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN95081501.9189889514521175No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)