FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004039591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7520544
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG177900.2365520366611777No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG150010.19946695345443097No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG143010.19015911614904454No Hit
GACTGACCGGCAAGTTGGACGCCCGCAAGATCCGCGAGATTCTCATTAAG97130.1291528910674547No Hit
CTTTGTGTTTGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT96140.12783649693426433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)