FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004039608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences945379
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49950.5283595256505592No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24290.2569339915525942No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15130.16004163409595518No Hit
GACTGACCGGCAAGTTGGACGCCCGCAAGATCCGCGAGATTCTCATTAAG10650.11265323219576487No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)