FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004039618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences883521
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG337823.8235650312782608No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17860.20214573281223652No Hit
GACTGACCGGCAAGTTGGACGCCCGCAAGATCCGCGAGATTCTCATTAAG10070.11397578552179291No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)