FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004039661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences741579
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43790.5904967643366384No Hit
CTTTGTGTTTGAGGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT13230.17840311012043222No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)