FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004039663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5776687
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTGTGTTTGAGGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT104850.18150541997515185No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG69850.12091705851468151No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59870.10364072001823883No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG58780.1017538253327556No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)