FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004039665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5978483
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTGTGTTTGAGGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT111380.18630144135226276No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64550.10797053366213469No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59830.10007555428358667No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)