FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004039668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1694387
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG55580.3280242353134201No Hit
CTTTGTGTTTGAGGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT33610.1983608231177411No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23880.14093592549990056No Hit
TTGTGTTTGAGGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATTG17100.1009214541896273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)