FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004039671

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039671
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1010990
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG81570.8068329063591133No Hit
CTTTGTGTTTGAGGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT22060.2182019604546039No Hit
TTGTGTTTGAGGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATTG12400.12265205392733855No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)