FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004039675

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039675
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3518420
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG78520.22316835397706924No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG68140.19366647529288714No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG52520.14927154802439732No Hit
GACTGACCGGCAAGTTGGACGCCCGCAAGATCCGCGAGATTCTCATTAAG40710.11570534501281825No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)