FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004039678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences818277
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG245663.002161859614776No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12100.14787168648269475No Hit
GACTGACCGGCAAGTTGGACGCCCGCAAGATCCGCGAGATTCTCATTAAG9940.12147475732545336No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)