FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004039689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4547199
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG123670.271969623497894No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG122710.26985843373030294No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG119300.26235931174333915No Hit
GACTGACCGGCAAGTTGGACGCCCGCAAGATCCGCGAGATTCTCATTAAG50040.11004576663568057No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)