FastQCFastQC Report
Wed 8 May 2024
EGAF00004039718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences643020
Total Bases48.8 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG392366.101831980342758No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7820.12161363565674473No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)