FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004039795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4140061
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG105250.2542233073377421No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG86290.20842688066673412No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG75730.18292001011579298No Hit
CTTTGTGTTTGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT67500.16304107596482276No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT42280.10212409913766972No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)