FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004039800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1203035
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG74550.6196827191228851No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36700.30506178124493466No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22070.1834526842527441No Hit
CTTTGTGTTTGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT18850.15668704568030026No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT13180.10955624732447518No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)