FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004039805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences650538
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG82421.2669513541099828No Hit
CTTTGTGTTTGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT11640.17892882506479252No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT7580.1165189427827429No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)