FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004039824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004039824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1345144
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG81720.6075186002390822No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40840.30361061715325643No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28640.2129140077196196No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT27790.20659498165252194No Hit
CTTTGTGTTTGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT21970.16332823846368863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)