FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004043859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004043859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10146776
Sequences flagged as poor quality0
Sequence length35-101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT314000.3094579007164443TruSeq Adapter, Index 7 (97% over 36bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG115260.11359273132667952No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)