Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004043919 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2208551 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-101 |
%GC | 61 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATAATCATCTCGTAT | 30084 | 1.3621600769010995 | TruSeq Adapter, Index 7 (97% over 35bp) |
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 21566 | 0.9764773374035738 | No Hit |
GGGCTACCACCCACCCTCTCAGTCTTGTGAAGAGTCTGGGACCTCCTTCT | 3112 | 0.14090686608550132 | No Hit |
GGGAGGTTCCTGTGTGGATGGGGAAAATGGCTTCCGCTGCCTCTGCCCGC | 3005 | 0.13606206059991371 | No Hit |
GCCAGAAGGAGAGAGAAAGGAATGAGGGAAGAGAGAAGTGGGGAAGAAGG | 2365 | 0.10708378479826819 | No Hit |
GGAGGTTCCTGTGTGGATGGGGAAAATGGCTTCCGCTGCCTCTGCCCGCC | 2276 | 0.10305399331960186 | No Hit |