Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004044181 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2144143 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-101 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT | 44144 | 2.058817905335605 | TruSeq Adapter, Index 27 (97% over 39bp) |
GTCAGAGTGTAAGGAAATGAGAGGCCAGAAGGAGAGAGAAAGGAATGAGG | 4457 | 0.20786859831643692 | No Hit |
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 3060 | 0.14271436186858805 | No Hit |
GGAAATGAGAGGCCAGAAGGAGAGAGAAAGGAATGAGGGAAGAGAGAAGT | 2585 | 0.12056098870271245 | No Hit |