FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004044481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004044481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10159316
Sequences flagged as poor quality0
Sequence length35-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTCGACTGATCTCGTAT890630.8766633501704248TruSeq Adapter, Index 12 (97% over 37bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG183330.18045506213213566No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)