FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004044500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004044500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1475059
Sequences flagged as poor quality0
Sequence length35-101
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN527483.575992553518198No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG175801.1918167341102965No Hit
GGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC18300.12406283409680562No Hit
GCGGCGGCGGCGGCGGCGGCGGGACCGAAACCCCCCCCGAG17180.11646991747448746No Hit
GGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC15390.1043348096584611No Hit
GGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC15330.1039280462679798No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)