FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004044676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004044676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1537516
Sequences flagged as poor quality0
Sequence length35-101
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN590433.8401551593609433No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG196591.2786208403684904No Hit
GGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC18960.123315789884463No Hit
GCGGCGGCGGCGGCGGCGGCGGGACCGAAACCCCCCCCGAG16720.10874683580528594No Hit
GGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC15820.102893238184188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)