FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004044789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004044789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1608786
Sequences flagged as poor quality0
Sequence length35-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTAGCTCATCTCGTAT43080.26777955551577404TruSeq Adapter, Index 22 (97% over 37bp)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN17360.10790745319762853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)