Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004044829 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2223285 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-101 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 31658 | 1.423929005952903 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTAT | 20702 | 0.9311446800567629 | TruSeq Adapter, Index 6 (97% over 36bp) |
GCCAGAAGGAGAGAGAAAGGAATGAGGGAAGAGAGAAGTGGGGAAGAAGG | 6885 | 0.30967689702399825 | No Hit |
GGGCTACCACCCACCCTCTCAGTCTTGTGAAGAGTCTGGGACCTCCTTCT | 5684 | 0.25565773168981937 | No Hit |
GTCAGAGTGTAAGGAAATGAGAGGCCAGAAGGAGAGAGAAAGGAATGAGG | 3155 | 0.141907132913684 | No Hit |
GGCTACCACCCACCCTCTCAGTCTTGTGAAGAGTCTGGGACCTCCTTCTT | 2387 | 0.10736365333279359 | No Hit |