FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004044830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004044830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2223285
Sequences flagged as poor quality0
Sequence length35-101
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN321461.4458785086032604No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG260771.1729040586339583No Hit
GCCAGAAGGAGAGAGAAAGGAATGAGGGAAGAGAGAAGTGGGGAAGAAGG51510.23168419703276907No Hit
GGGCTACCACCCACCCTCTCAGTCTTGTGAAGAGTCTGGGACCTCCTTCT40880.1838720631857814No Hit
GGGGCTACCACCCACCCTCTCAGTCTTGTGAAGAGTCTGGGACCTCCTTC39990.17986897766143342No Hit
GTCAGAGTGTAAGGAAATGAGAGGCCAGAAGGAGAGAGAAAGGAATGAGG23080.10381035269882179No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)