FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004045473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004045473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2673820
Sequences flagged as poor quality0
Sequence length35-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTAT61240.22903561197088806TruSeq Adapter, Index 6 (97% over 36bp)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN37620.14069757874501648No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)