FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004045672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004045672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1535702
Sequences flagged as poor quality0
Sequence length35-101
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN597203.8887752962488817No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG180391.174641955275177No Hit
GGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC19560.1273684608081516No Hit
GCGGCGGCGGCGGCGGCGGCGGGACCGAAACCCCCCCCGAG16280.10601015040678465No Hit
GGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC15740.10249384320655959No Hit
GGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGC15590.1015170912064971No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)