FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004046464

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004046464
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences921729
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAACTCATCCTTTGCACCTCAGACGTCTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCG20240.2195873190493084No Hit
GTATCAACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATAG12990.1409307941922192No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCG12700.13778453319793563No Hit
GTGGAGATGGACTCAGGATCCAGTGACATGATTCTGAACTTTTGTGGAGTTTGACACCTTAGAGAAGCTACCCCT9790.10621343149667635No Hit
GGTATCAACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATA9370.10165677764288636No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)