FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004046622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004046622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1523815
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATAG26650.17488999648907513No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCG25640.16826189530881375No Hit
GGTATCAACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATA20140.13216827502026163No Hit
GCAACTCATCCTTTGCACCTCAGACGTCTCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCT16310.10703399034659719No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGT16160.10604961888418213No Hit
CGTGGTTACACGGAGCTGCTCAGGGACTTTGTTTCCAACCGGGGTGCATCTAATCTTGTCTTCCTGAGGATGATG15780.10355587784606399No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)