FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004046673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004046673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences856223
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCG28140.32865269912160733No Hit
GTATCAACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATAG27980.3267840270583715No Hit
GCAACTCATCCTTTGCACCTCAGACGTCTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCG22450.262198048872782No Hit
GGTATCAACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATA20540.23989077611790388No Hit
GCAACTCATCCTTTGCACCTCAGACGTCTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCT17570.20520355094408815No Hit
GGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCC16690.19492585459629092No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGT16130.1883855023749654No Hit
GTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATAGCACCAGAACACAA12480.14575642093239727No Hit
GTGCTATCCAGGCCCAGCAGCGGGTTCGGAATCGGTTTGCCCATGGTGGATCCGCGCCCATGTACTCTGCGTTGA11920.13921606871107176No Hit
TATCAACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATAGC11490.1341940125411254No Hit
CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCA10790.12601857226446847No Hit
GGCTGCACACTCAGCAGATTCAGCGGCTGGAAACAGCAAGTGGGTTTCTTCGGATGAAAGGGAAGAATTCAGTCC10370.12111330809847436No Hit
ACGCAGAGTACATGGGCGCGGATCCACCATGGGCAAACCGATTCCGAACCCGCTGCTGGGCCTGGATAGCACCAG10340.12076293208661763No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA10160.11866067601547726No Hit
GGACAATGGAGTGTTTGCCATTGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTGTCTTGTCACAGTCCCAGCA10040.11725917196805037No Hit
ACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTG9850.11504012389295779No Hit
GGGACGGGTGGTGGCTCGCCTCGCTGCGGACCGCCCGCCCGCTCCCAAGATCCAACTACGAGCTTTTTAACTGCA9320.108850147683489No Hit
ATACAACTACCTGTTTTTATACATAAAGTTTCATTGAATGTAGCCACACTAATGTGTTTACATATTGGCGATGAC8980.10487921954911278No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)