FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004046965

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004046965
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences828502
Sequences flagged as poor quality0
Sequence length75
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAACTCATCCTTTGCACCTCAGACGTCTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCG34490.4162935032142348No Hit
GCAACTCATCCTTTGCACCTCAGACGTCTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCT13370.16137559112711858No Hit
GCAACAGAGCCCGATAGAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCG9830.11864787290797126No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)