FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004048559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004048559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences992099
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT22110.22286082336541013No Hit
TGTCCATGGCATCCATAGCGTCTGTCTCTTATACACATCTCCGAGCCCAC15700.15825033590397733No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)