FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004048568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004048568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1752711
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCCATGGCATCCATAGCGTCTGTCTCTTATACACATCTCCGAGCCCAC159700.9111599117024997No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT28450.16231997174662566No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18730.10686302533617921No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)