FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004048801

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004048801
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1167048
Sequences flagged as poor quality0
Sequence length76
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTCCTCCTTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGC188741.6172428212035836No Hit
TGTCCATGGCATCCATAGCGTCTGTCTCTTATACACATCTCCGAGCCCAC172871.481258697157272No Hit
CCTTCAGACCTGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGG27500.23563726599077328No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA26340.22569765767988975No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTC17890.15329275231181577No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA17640.1511505953482633No Hit
CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGT14590.125016280392923No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC14190.12158882925123903No Hit
TGACTCCTCCTTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGC14050.12038922135164964No Hit
CGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTC12730.1090786325840925No Hit
ATGCACTGCAGGTACTTGACTGTCTCTTATACACATCTCCGAGCCCACGA12690.1087358874699241No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA12020.10299490680760347No Hit
GGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATC11920.10213804402218246No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)