FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004048935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004048935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences959424
Sequences flagged as poor quality0
Sequence length76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCCATGGCATCCATAGCGTCTGTCTCTTATACACATCTCCGAGCCCAC15130.15769878593822959No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA11510.11996781402174637No Hit
GGACTCCTCCTTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGCA10000.10422920418918016No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)