FastQCFastQC Report
Mon 6 Mar 2023
EGAF00004149981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004149981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130271948
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCCTCGTTCATGGGGAATA3228840.24785382037888926No Hit
ACAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCCTCGTTCATGGGGAATAAT1849470.1419699350776577No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)