FastQCFastQC Report
Wed 22 May 2024
EGAF00004150088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004150088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130625904
Total Bases9.7 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT1991830.1524835380278019No Hit
CCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAG1306640.10002916420008086No Hit

[OK]Adapter Content

Adapter graph