FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004151003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1706316
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTGGGTGATTATTTTTTATACTGTATGTGCCAAAGCTTTACTACTGTG49360.2892781876276141No Hit
ATGGTGGGTGATTATTTTTTATACTGTATGTGCCAAAGCTTTACTACTGT34800.203948154972467No Hit
GGTGGGTGATTATTTTTTATACTGTATGTGCCAAAGCTTTACTACTGTGG23600.13830966831466154No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23270.13637567718992263No Hit
TATGGTGGGTGATTATTTTTTATACTGTATGTGCCAAAGCTTTACTACTG23140.13561380189835878No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)