FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004151082

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151082
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2011901
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC87900.4369002252098885No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA74190.36875571909353394No Hit
GGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAG59190.2941993666686383No Hit
GGGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAA57170.2841591112087523No Hit
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG53290.2648738680481793No Hit
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC52470.26079812078228504No Hit
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCA50460.250807569557349No Hit
GGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG50020.24862058321955205No Hit
GGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGT40650.2020477150714672No Hit
GGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA36220.18002873898864805No Hit
GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG33500.16650918708226697No Hit
GGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGC32280.16044527041837547No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCA24910.12381324926027673No Hit
CGGGGGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGG22350.11108896511309453No Hit
TTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCAG21590.10731144325689983No Hit
CGAATGGGGAAACCTACTAGACACACTCTAGTATCCATACGTAAATACAT21570.10721203478699995No Hit
GAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCG21130.10502504844920302No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)