FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004151120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1555467
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC32790.21080485796227114No Hit
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCA29880.19209665007357918No Hit
GGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG17870.11488511167385743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)