FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004151213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1983790
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTTGGTGAAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG23400.11795603365275559No Hit
GGGAGGGGGGGTTTGGTGAAAATTTTTTGTTATGATGTCTGTGTGGAAAG23240.11714949667051451No Hit
GGGGTTTGGTGAAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGT22870.11528437989908205No Hit
GGGGAGGGGGGGTTTGGTGAAAATTTTTTGTTATGATGTCTGTGTGGAAA22010.11094924361953634No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)