FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004151226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences805944
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAA77760.964831303415622No Hit
TGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGA61090.7579931111839036No Hit
TTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGG30760.38166423473591216No Hit
GGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAA25080.31118787409547066No Hit
GGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGA15850.19666378805475318No Hit
GCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAG15670.1944303822598096No Hit
CAGCCCAATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCA14680.18214665038761998No Hit
GGGGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAA11810.14653623576824198No Hit
CAATCAACCAACAAGTCATTATTACCCTCACTGTCAACCCAACACAGGCA10500.13028200470504153No Hit
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC10180.12631150551403075No Hit
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCA10050.12469849021768262No Hit
GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAG8760.10869241535392037No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)